BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C06SP1|AL430198
(901 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1174 1774 0.0
>3x_Contig1174
Length = 6106
Score = 1774 bits (895), Expect = 0.0
Identities = 899/901 (99%)
Strand = Plus / Minus
Query: 1 tgtttgaattgcgaatccaagaacacatcgttataaaactttaatagacttcttctcaac 60
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6083 tgtntgaattgcgaatccaagaacacatcgttatanaactttaatagacttcttctcaac 6024
Query: 61 atagaatcgctgataatgtcctgattcatggctatccgtgtaagtttttgttctaatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6023 atagaatcgctgataatgtcctgattcatggctatccgtgtaagtttttgttctaatgct 5964
Query: 121 tgtaaaacctgtttcatagattctttattgtatgaggagcctccaatgctgcttcggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5963 tgtaaaacctgtttcatagattctttattgtatgaggagcctccaatgctgcttcggttg 5904
Query: 181 ttatcgtcttcgtcctcatcatcactgggatcatgagaaaaccacgttgataatctatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5903 ttatcgtcttcgtcctcatcatcactgggatcatgagaaaaccacgttgataatctatta 5844
Query: 241 ctaccattgtcatggctcgcacccttcactcgtagcctttgagaattcacattggaacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843 ctaccattgtcatggctcgcacccttcactcgtagcctttgagaattcacattggaacct 5784
Query: 301 acccgtttccacttccttctgaacctgggctcattaatgtacgcaaataaaactaccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5783 acccgtttccacttccttctgaacctgggctcattaatgtacgcaaataaaactaccttt 5724
Query: 361 aatacgttggagtataccagatcaaggtcatcgcataaagaataaccagtgtccaaggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5723 aatacgttggagtataccagatcaaggtcatcgcataaagaataaccagtgtccaaggga 5664
Query: 421 acaaagtcaaacgtttctcccagtgaaggggtagaaaacgaagaatctgtggataatatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5663 acaaagtcaaacgtttctcccagtgaaggggtagaaaacgaagaatctgtggataatatc 5604
Query: 481 ctaaactggttcatggataccttcgcctaccgaaactgtccgctattttggtcggtttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5603 ctaaactggttcatggataccttcgcctaccgaaactgtccgctattttggtcggtttgt 5544
Query: 541 gtcttttaaggttcgttcttatgtatttgttttgtttattagagatccaagtttcataaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5543 gtcttttaaggttcgttcttatgtatttgttttgtttattagagatccaagtttcataaa 5484
Query: 601 ggcggactcttcaagaatttagatacagatcgatggtacataattagatgccaagacata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5483 ggcggactcttcaagaatttagatacagatcgatggtacataattagatgccaagacata 5424
Query: 661 aaagttagaggataaagacgagtaaaataagcgtggtgtcgataatgatacaataagata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5423 aaagttagaggataaagacgagtaaaataagcgtggtgtcgataatgatacaataagata 5364
Query: 721 tggcgggagctatttagcattatatatatattgttaatgtcaaggctctaagtcgctatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5363 tggcgggagctatttagcattatatatatattgttaatgtcaaggctctaagtcgctatg 5304
Query: 781 ctgttcagtgatttcgtctttttctgattttgcaaggttgaataaatgcttcgagagtat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5303 ctgttcagtgatttcgtctttttctgattttgcaaggttgaataaatgcttcgagagtat 5244
Query: 841 tttattcaacgtgaacatggtcatcttctcaccaaaaatgggtttcatggcatcatcaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5243 tttattcaacgtgaacatggtcatcttctcaccaaaaatgggtttcatggcatcatcaca 5184
Query: 901 t 901
|
Sbjct: 5183 t 5183
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8854
Number of Sequences: 1807
Number of extensions: 8854
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 901
length of database: 10,358,551
effective HSP length: 16
effective length of query: 885
effective length of database: 10,329,639
effective search space: 9141730515
effective search space used: 9141730515
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)